PIs: Prof. Stefanie Reese, Prof. Marek Behr, Priv.-Doz. Felix Vogt
Aim:
The project aims at the development and validation of a versatile high throughput computational framework, based on fluoroscopic and intravital optical coherence tomography (OCT) imaging of actual patients and animal experiments, allowing for in silico simulation of the arterial reaction to stent implantation.
Description:
The project aims at the development and validation of a versatile high throughput computational framework, based on fluoroscopic and intravital optical coherence tomography (OCT) imaging of actual patients and animal experiments, allowing for in silico simulation of the arterial reaction to stent implantation. The in silico studies shall crucially support systemic antithrombotic, lipid-lowering and anti-inflammatory drug treatment regimens in addition to personalized treatments. Generalization steps are to be defined which orchestrate the way to tailor stent choice, hemodynamics and execution of the implantation procedure.
Advantages of such an in silico-based implantation procedure are higher speed, better cost effectiveness and enhanced versatility as compared to actual clinical trials as well as experimental setups. The aim is also to avoid animal experiments in the long run. The ultimate goal of the project is to develop a simulation tool (based on meta modeling) which enables quick decisions on the part of the interventional cardiologists, for instance with respect to the geometry of the stent, the extent of balloon overstretch, or the amount/rate of drug elution.
Involved Institutions:
Institute of Applied Mechanics, RWTH Aachen University
Chair for Computational Analysis of Technical Systems, RWTH Aachen University
Clinic for Cardiology, Angiology and Internal Intensive Care Medicine, RWTH Aachen University
Links:
Applicants:
Publications
Manjunatha, K.; Ranno, A.; Shi, J.; Schaaps, N.; Florescu, R.; Nilcham, P.; Cornelissen, A.; Behr, M.; Reese, S.
In Silico Reproduction of the Pathophysiology of In-Stent Restenosis Unveröffentlicht
2024.
@unpublished{Manjunatha2024b,
title = {In Silico Reproduction of the Pathophysiology of In-Stent Restenosis},
author = {K. Manjunatha and A. Ranno and J. Shi and N. Schaaps and R. Florescu and P. Nilcham and A. Cornelissen and M. Behr and S. Reese},
editor = {Cornell University},
url = {https://arxiv.org/abs/2401.03961},
doi = {10.48550/arXiv.2401.03961},
year = {2024},
date = {2024-05-07},
abstract = {The occurrence of in-stent restenosis following percutaneous coronary intervention highlights the need for the creation of computational tools that can extract pathophysiological insights and optimize interventional procedures on a patient-specific basis. In light of this, a comprehensive framework encompassing multiple physical phenomena is introduced in this work. This framework effectively captures the intricate interplay of chemical, mechanical, and biological factors. In addition, computational approaches for the extraction of hemodynamic indicators that modulate the severity of the restenotic process are devised. Thus, this marks a significant stride towards facilitating computer-assisted clinical methodologies.},
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Ranno, A.; Manjunatha, K.; Glitz, A.; Schaaps, N.; Reese, S.; Vogt, F.; Behr, M.
In-silico Analysis of Hemodynamic Indicators in Idealized Stented Coronary Arteries for Varying Stent Indentation Unveröffentlicht
2024.
@unpublished{Ranno2024,
title = {In-silico Analysis of Hemodynamic Indicators in Idealized Stented Coronary Arteries for Varying Stent Indentation},
author = {A. Ranno and K. Manjunatha and A. Glitz and N. Schaaps and S. Reese and F. Vogt and M. Behr},
editor = {Cornell University},
url = {https://arxiv.org/abs/2401.08701},
doi = {10.48550/arXiv.2401.08701},
year = {2024},
date = {2024-01-14},
urldate = {2024-01-14},
abstract = {In this work, we investigate the effects of stent indentation on hemodynamic indicators in stented coronary arteries. Our aim is to assess in-silico risk factors for in-stent restenosis (ISR) and thrombosis after stent implantation. The proposed model is applied to an idealized artery with Xience V stent for four indentation percentages and three mesh refinements. We analyze the patterns of hemodynamic indicators arising from different stent indentations and propose an empirical frequency analysis of time-averaged WSS (TAWSS), oscillatory shear index (OSI), and relative residence time (RRT). We observe that higher indentations display higher frequency of critically low TAWSS and non-physiological OSI and RRT. Furthermore, an appropriate mesh refinement is needed for accurate representation of hemodynamics in the stent vicinity. The results provide physics-based evidence for the correlation between high indentation and ISR.},
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Manjunatha, K.; Schaaps, N.; Behr, M.; Vogt, F.; Reese, S.
Computational Modeling of In-Stent Restenosis: Pharmacokinetic and Pharmacodynamic Evaluation Artikel
In: Computers in Biology and Medicine, Ausg. 167, 2023.
@article{Manjunatha2023,
title = {Computational Modeling of In-Stent Restenosis: Pharmacokinetic and Pharmacodynamic Evaluation},
author = {K. Manjunatha and N. Schaaps and M. Behr and F. Vogt and S. Reese},
editor = {National Library Medicine},
url = {https://pubmed.ncbi.nlm.nih.gov/37972534/},
doi = {10.1016/j.compbiomed.2023.107686},
year = {2023},
date = {2023-12-01},
urldate = {2023-12-01},
journal = {Computers in Biology and Medicine},
issue = {167},
abstract = {Persistence of the pathology of in-stent restenosis even with the advent of drug-eluting stents warrants the development of highly resolved in silico models. These computational models assist in gaining insights into the transient biochemical and cellular mechanisms involved and thereby optimize the stent implantation parameters. Within this work, an already established fully-coupled Lagrangian finite element framework for modeling the restenotic growth is enhanced with the incorporation of endothelium-mediated effects and pharmacological influences of rapamycin-based drugs embedded in the polymeric layers of the current generation drug-eluting stents. The continuum mechanical description of growth is further justified in the context of thermodynamic consistency. Qualitative inferences are drawn from the model developed herein regarding the efficacy of the level of drug embedment within the struts as well as the release profiles adopted. The framework is then intended to serve as a tool for clinicians to tune the interventional procedures patient-specifically.},
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Cornelissen, A.; Florescu, R. A.; Reese, S.; Behr, M.; Ranno, A.; Manjunatha, K.; Schaaps, N.; Böhm, C.; Liehn, E. A.; Zhao, L.; Nilcham, P.; Milzi, A.; Schröder, J.; Vogt, F. J.
In-Vivo Assessment of Vascular Injury for the Prediction of In-Stent Restenosis Artikel
In: International Journal of Cardiology, Ausg. 388, 2023.
@article{Cornelissen2023,
title = {In-Vivo Assessment of Vascular Injury for the Prediction of In-Stent Restenosis},
author = {A. Cornelissen and R. A. Florescu and S. Reese and M. Behr and A. Ranno and K. Manjunatha and N. Schaaps and C. Böhm and E. A. Liehn and L. Zhao and P. Nilcham and A. Milzi and J. Schröder and F. J. Vogt},
editor = {National Library Medicine},
url = {https://pubmed.ncbi.nlm.nih.gov/37423572/},
doi = {10.1016/j.ijcard.2023.131151},
year = {2023},
date = {2023-07-07},
urldate = {2023-07-07},
journal = {International Journal of Cardiology},
issue = {388},
abstract = {Background: Despite optimizations of coronary stenting technology, a residual risk of in-stent restenosis (ISR) remains. Vessel wall injury has important impact on the development of ISR. While injury can be assessed in histology, there is no injury score available to be used in clinical practice.
Methods: Seven rats underwent abdominal aorta stent implantation. At 4 weeks after implantation, animals were euthanized, and strut indentation, defined as the impression of the strut into the vessel wall, as well as neointimal growth were assessed. Established histological injury scores were assessed to confirm associations between indentation and vessel wall injury. In addition, stent strut indentation was assessed by optical coherence tomography (OCT) in an exemplary clinical case. Results: Stent strut indentation was associated with vessel wall injury in histology. Furthermore, indentation was positively correlated with neointimal thickness, both in the per-strut analysis (r = 0.5579) and in the per-section analysis (r = 0.8620; both p ≤ 0.001). In a clinical case, indentation quantification in OCT was feasible, enabling assessment of injury in vivo.
Conclusion: Assessing stent strut indentation enables periprocedural assessment of stent-induced damage in vivo and therefore allows for optimization of stent implantation. The assessment of stent strut indentation might become a valuable tool in clinical practice.
Keywords: In stent restenosis; Optical coherence tomography; Patient-individualized percutaneous coronary intervention; Prediction; Stent malapposition.},
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pubstate = {published},
tppubtype = {article}
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Manjunatha, K.; Behr, M.; Vogt, F.; Reese, S.
In: Computers in Biology and Medicine, Bd. 150, 2022.
@article{Manjunatha2022b,
title = {A Multiphysics Modeling Approach for In-Stent Restenosis: Theoretical Aspects and Finite Element Implementation},
author = {K. Manjunatha and M. Behr and F. Vogt and S. Reese},
editor = {Elsevier},
url = {https://www.sciencedirect.com/science/article/pii/S0010482522008745},
doi = {10.1016/j.compbiomed.2022.106166},
year = {2022},
date = {2022-11-15},
urldate = {2022-11-15},
journal = {Computers in Biology and Medicine},
volume = {150},
abstract = {Development of in silico models that capture progression of diseases in soft biological tissues are intrinsic in the validation of the hypothesized cellular and molecular mechanisms involved in the respective pathologies. In addition, they also aid in patient-specific adaptation of interventional procedures. In this regard, a fully-coupled high-fidelity Lagrangian finite element framework is proposed within this work which replicates the pathology of in-stent restenosis observed post stent implantation in a coronary artery. Advection–reaction–diffusion equations are set up to track the concentrations of the platelet-derived growth factor, the transforming growth factor-, the extracellular matrix, and the density of the smooth muscle cells. A continuum mechanical description of volumetric growth involved in the restenotic process, coupled to the evolution of the previously defined vessel wall constituents, is presented. Further, the finite element implementation of the model is discussed, and the behavior of the computational model is investigated via suitable numerical examples. Qualitative validation of the computational model is presented by emulating a stented artery. Patient-specific data are intended to be integrated into the model to predict the risk of in-stent restenosis, and thereby assist in the tuning of stent implantation parameters to mitigate the risk.},
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pubstate = {published},
tppubtype = {article}
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Manjunatha, K.; Behr, M.; Vogt, F.; Reese, S.
Finite Element Modeling of In-Stent Restenosis Buchabschnitt
In: Link, Springer (Hrsg.): S. 305–318, 2022.
@incollection{Manjunatha2022,
title = {Finite Element Modeling of In-Stent Restenosis},
author = {K. Manjunatha and M. Behr and F. Vogt and S. Reese},
editor = {Springer Link},
url = {https://link.springer.com/chapter/10.1007/978-3-030-87312-7_30},
doi = {10.1007/978-3-030-87312-7_30},
year = {2022},
date = {2022-03-13},
urldate = {2022-03-13},
pages = {305–318},
abstract = {From the perspective of coronary heart disease, the development of stents has come significantly far in reducing the associated mortality rate, drug-eluting stents being the epitome of innovative and effective solutions. Within this work, the intricate process of in-stent restenosis is modelled considering one of the significant growth factors and its effect on constituents of the arterial wall. A multiphysical modelling approach is adopted in this regard. Experimental investigations from the literature have been used to hypothesize the governing equations and the corresponding parameters. A staggered solution strategy is utilised to capture the transport phenomena as well as the growth and remodeling that follows stent implantation. The model herein developed serves as a tool to predict in-stent restenosis depending on the endothelial injury sustained and the protuberance of stents into the lumen of the arteries.},
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pubstate = {published},
tppubtype = {incollection}
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Aldakheel, F.; Hudobivnik, B.; Soleimani, M.; Wessels, H.; Weissenfels, C.; Marino, M.
Current Trends and Open Problems in Computational Mechanics Buch
Springer, 2022.
@book{Aldakheel2022,
title = {Current Trends and Open Problems in Computational Mechanics},
author = {F. Aldakheel and B. Hudobivnik and M. Soleimani and H. Wessels and C. Weissenfels and M. Marino},
editor = {Springer-Verlag},
url = {https://link.springer.com/book/10.1007/978-3-030-87312-7},
doi = {https://doi.org/10.1007/978-3-030-87312-7},
year = {2022},
date = {2022-03-12},
publisher = {Springer},
abstract = {This Festschrift is dedicated to Professor Dr.-Ing. habil. Peter Wriggers on the occasion of his 70th birthday. Thanks to his high dedication to research, over the years Peter Wriggers has built an international network with renowned experts in the field of computational mechanics. This is proven by the large number of contributions from friends and collaborators as well as former PhD students from all over the world. The diversity of Peter Wriggers network is mirrored by the range of topics that are covered by this book. To name only a few, these include contact mechanics, finite & virtual element technologies, micromechanics, multiscale approaches, fracture mechanics, isogeometric analysis, stochastic methods, meshfree and particle methods. Applications of numerical simulation to specific problems, e.g. Biomechanics and Additive Manufacturing is also covered. The volume intends to present an overview of the state of the art and current trends in computational mechanics for academia and industry.},
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pubstate = {published},
tppubtype = {book}
}
Haßler, S.; Ranno, A.; Behr, M.
In: CMAME, Ausg. 369, 2020.
@article{Haßler2020,
title = {Finite-Element Formulation for Advection–Reaction Equations with Change of Variable and Discontinuity Capturing},
author = {S. Haßler and A. Ranno and M. Behr},
editor = {Elsevier},
url = {https://www.sciencedirect.com/science/article/pii/S004578252030356X},
doi = {10.1016/j.cma.2020.113171},
year = {2020},
date = {2020-06-11},
urldate = {2020-06-11},
journal = {CMAME},
issue = {369},
abstract = {We propose a change of variable approach and discontinuity capturing methods to ensure physical constraints for advection–reaction equations discretized by the finite element method. This change of variable confines the concentration below an upper bound in a very natural way. For the non-negativity constraint, we propose to use a discontinuity capturing method defined on the reference element that is combined with an anisotropic crosswind-dissipation operator. This discontinuity capturing cannot completely eliminate negative values but effectively minimizes their occurrence. The proposed methods are applied to different biophysical models and show a good agreement with experimental results for the FDA benchmark blood pump for a physiological red blood cell pore formation model.},
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pubstate = {published},
tppubtype = {article}
}